进调剂群,获调剂指导
基因组医学研究院孙中生课题组
学校:温州医科大学
专业:理学
年级:2018
招生人数:4
招生状态:正在招生中
招生简介:
温州医科大学基因组医学研究院孙中生教授(院长)课题组基于国家发展战略和十三五规划(“脑科学与类脑研究”,“加速推进基因组学等生物技术大规模应用”),主要利用基因组学、生物信息学、医学遗传学、表观遗传学、分子生物学等研究手段从事复杂疾病、特别是神经精神类疾病(例如,孤独症、智力低下)和癌症的遗传学机制研究。本课题组经费充足,已经申请到多个国家级课题,具有各种生物学实验平台、生物信息学分析平台、具有良好的发展前景。科学研究上,本课题组在导师和学生的共同努力下,取得了多项突破性成功:
1、首次发现并报道节律基因PER1和PER2;
2、开发二代测序可视化工具MagicViewer和SplicingViewer,普通电脑可完成大数据可视化;
3、开发MicroRNA在线分析工具,被评为业内最准确的工具之一;
4、通过全外显子测序鉴定到中国第一个孤独症致病基因ANK3;
5、通过高通量测序鉴定肌萎缩侧索硬化症致病基因SOD1;
6、开发了第一款全面的在线的甲基化分析软件RRBS-Analyser;
7、开发了癫痫相关突变与基因数据库EpilepsyGene;
8、开发了第一款在线分析新生突变的工具mirTrios;
9、基于新生突变,首先系统分析神经精神疾病的共有基因和通路,并开发NPdenovo数据库;
10、开发低起始量,单精度的DNA甲基化图谱的实验与分析方法MBRidge;
11、开发单细胞DNA甲基化图谱的实验与分析方法Q-RRBS;
12、开发第一款RNA结合蛋白调控数据库RBP-Var;
13、首次使用全基因组测序分析中国自闭症患者突变图谱;
14、首次鉴定到多个自闭症新基因并进行了深入的分子机制研究;
15、开发相关致病基因信息的功能注释平台EpiDenovo;
16、开发节律表达和调控数据库CirGRDB;
17、开发人类基因变异与临床信息整合数据库VarCards。
本课题组在Cell, Molecular Psychiatry, PNAS, Nucleic Acids Research, Journal of Molecular Cell Biology, Genetics in Medicine等国际权威杂志发表论文。
调剂名额:
生物信息学、基因组学等方向1-2名,遗传学、分子生物学等方向1-2名,共计3-4名。
如有意向且符合条件者,请将简历发送至邮件zy_bioinformatics@163.com,我们会根据实际情况回复调剂生。
导师介绍:
孙中生教授简介如下:
博士,研究员,博士生导师,中国遗传学会表观遗传专业委员会主任, Hormones and Behavior杂志编委。1982年北京大学学士;1992年美国德克萨斯A&M大学博士;1993-1998年先后在德克萨斯大学安德生癌症研究中心放射治疗系、贝勒医学院分子人类遗传学系做博士后;1998-1999年任路易斯安那州立大学神经科学中心助理教授、主任助理,同时任生物化学和遗传系助理教授;1999-2005年在美国康奈尔大学任助理教授,威尔医学院特护医学实验室主任;2005-2010年在中国科学院心理研究所行为遗传学中心任研究员,2010年至今任北京生科院研究员。1997年,荣获Science杂志十大科学突破,2006年入选中科院“百人计划”,并入选“新世纪百千万人才工程”。
学生待遇:
1、每月发放不低于1300元的生活补贴;
2、所有在读研究生均享受8000-10000元/年的助学金,可抵消全部学费;
3、研究生期间,学生均有自己独立负责的课题,同时参与、合作课题组其他相关课题;
应聘要求:
1.本次招生重点面对生物信息学、基因组学、遗传学、分子生物学等专业;
2.同时欢迎有医学、计算机、数学背景的毕业生;
3.良好的英语阅读写作及听说交流能力;
4.吃苦耐劳,有探索精神,对生命科学研究有浓厚兴趣;
5.有计算机操作、编程基础者或者相关生物实验经验者优先;
6.硕士毕业后有意向继续深造者优先;
7.符合温州医科大学硕士研究生招生调剂条件:http://yjsy.wmu.edu.cn/
学术成果:
2017年:
Liang J, Feng D, Cai W, Teng H, Mao F, Jiang Y, Hu S, Li X, Zhang Y, Liu B, Sun Z. Genetic landscape of papillary thyroid carcinoma in the Chinese population: Somatic mutational profile of PTC in China. Journal of Pathology. 2017, doi: 10.1002/path.5005. (IF= 6.894)
Mao F, Liu Q, Zhao X, Yang H, Guo S, Xiao L, Li X, Teng H, Sun Z, Dou Y. EpiDenovo: a platform for linking regulatory de novo mutations to developmental epigenetics and diseases. Nucleic Acids Res. 2017 Oct 10. doi: 10.1093/nar/gkx918. (IF= 10.162)
Li J, Shi L, Zhang K, Zhang Y, Hu S, Zhao T, Teng H, Li X, Jiang Y, Ji L, Sun Z. VarCards: an integrated genetic and clinical database for coding variants in the human genome. Nucleic Acids Res. 2017 Nov 3. doi: 10.1093/nar/gkx1039. (IF= 10.162)
Li X, Shi L, Zhang K, Wei W, Liu Q, Mao F, Li J, Cai W, Chen H, Teng H, Li J, Sun Z. CirGRDB: a database for the genome-wide deciphering circadian genes and regulators. Nucleic Acids Res. 2017 Oct 20. doi: 10.1093/nar/gkx944. (IF= 10.162)
Li J, Sun ZS, Xia K. Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders. Mol Psychiatry. 2017,22(9):1282-1290. (IF= 13.204)
Zhong JN, Li XF, Cai WS, Wang Y, Dong SS, Yang J, Zhang J, Wu NN, Li YY, Mao FB, Zeng C, Wu JY, Xu NZ, Sun ZS. TET1 modulates H4K16 acetylation by controlling auto-acetylation of hMOF to affect gene regulation and DNA repair function. Nucleic Acids Res. 2017,45(2):672-684. (IF= 10.162)
Wang J, Zhang K, Chen X, Liu X, Teng H, Zhao M, Sun Z. Epigenetic Activation of ASCT2 in the Hippocampus Contributes to Depression-Like Behavior by Regulating D-Serine in Mice. Front Mol Neurosci. 2017,10:139. doi: 10.3389/fnmol.2017.00139.eCollection. (IF= 5.076 )
Yan Wang, Huijie Liu, Zhongsheng Sun. Lamarck rises from his grave: parental environment-induced epigenetic inheritance in model organisms and humans. Biological Reviews , 2017. (IF= 11.615 )
Zhuang Miao, Fengbiao Mao, Moshe Szyf, Yan Wang, ZhongSheng Sun. Anxiety-Related Behaviours Associated with microRNA-206-3p and BDNF Expression in Pregnant Female Mice Following Psychological Social Stress. Molecular Neurobiology, 2017.(IF=5.397)
2016年:
Jianing Zhong, Xianfeng Li, Wanshi Cai, Shanshan Dong, Jie Yang, Jian 'an Zhang, Nana Wu, Yuanyuan Li, Mao Fengbiao, Cheng Zeng, Jinyu Wu, Xingzhi Xu, Zhongsheng Sun.TET1 modulates H4K16 acetylation by controlling auto-acetylation of hMOF to affect gene regulation and DNA repair function. Nucleic Acids Research ,2016.(IF= 9.202)
Weiping Tian, Jiesi Wang, Ke Zhang, Huajing Teng, Chong Li, Moshe Szyf, Zhong Sheng Sun & Mei Zhao. Demethylation of c-MYB binding site mediates upregulation of Bdnf IV in cocaine-conditioned place preference OPEN. Scientific Reports, 2016. (IF=5.578)
Fengbiao Mao, Luoyuan Xiao, Xianfeng Li, Jialong Liang, Huajing Teng, Wanshi Cai, and Zhong Sheng Sun. RBP-Var: a database of functional variants involved in regulation mediated by RNA-binding proteins. NUCLEIC ACIDS RESEARCH, 2016. (IF= 9.202)
2015年:
Li JC, Cai T, Jiang Y, Chen HQ, He X, Chen C, Li XF, Shao QZ, Ran X, Li ZS, Xia K, Liu CY, Sun ZS, Wu JY. Genes with de novo mutations are shared by four neuropsychiatric disorders discovered from NPdenovo database. Molecular Psychiatry, 2015. (IF=15.147)
Wanshi Cai , Fengbiao Mao , Huajing Teng, Tao Cai, Fangqing Zhao, Jinyu Wu and Zhong Sheng Sun. MBRidge An accurate and cost-effective method for profiling DNA methylome at single-base resolution. Journal of Moleucular Cell Biology, 2015. (IF=6.771)
Kangli Wanga, Xianfeng Libc, Shanshan Donga, Jialong Liangbd, Fengbiao Maobd, Cheng Zengb, Honghu Wua, Jinyu Wuab, Wanshi Caib & Zhong Sheng Sunab. Q-RRBS A quantitative reduced representation bisulfite sequencing method for single-cell methylome analyses. Epigenetics, 2015. (IF=4.780)
2014年:
Yan Wang, Guiling Li, Fengbiao Mao, Xianfeng Li, Qi Liu, Lin Chen, Lu Lv, Xin Wang, Jinyu Wu, Wei Dai, Guan Wang, Enfeng Zhao, Kai-Fu Tang and Zhong Sheng Sun. Ras-induced Epigenetic Inactivation of the RRAD Ras-related Associated with Diabetes Gene Promotes Glucose Uptake in a Human Ovarian Cancer Model. JURNAL OF BIOLOGICAL CHEMISTRY, 2014. (IF=4.573)
Qing Xie , Qi Liu , Fengbiao Mao, Wanshi Cai, Honghu Wu, Mingcong You, Zhen Wang, Bingyu Chen, Zhong Sheng Sun , Jinyu Wu . A Bayesian Framework to Identify Methylcytosines from High-Throughput Bisulfite Sequencing Data. PLOS Computational Biology, 2014. (IF=4.620)
Xia Ran, Jinchen Li, Qianzhi Shao, Huiqian Chen, Zhongdong Lin, Zhong Sheng Sun and Jinyu Wu. EpilepsyGene: a genetic resource for genes and mutations related to epilepsy. NUCLEIC ACIDS RESEARCH, 2014. (IF=9.112)
温州医科大学 基因组医学研究院
2018年 3 月 14 日